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Ensembl Project

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  1. ensembl-vep ensembl-vep Public

    The Ensembl Variant Effect Predictor predicts the functional effects of genomic variants

    Perl 578 191

  2. VEP_plugins VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Perl 174 123

  3. WiggleTools WiggleTools Public

    Basic operations on the space of numerical functions defined on the genome using lazy evaluators for flexibility and efficiency

    C 155 25

  4. ensembl-rest ensembl-rest Public archive

    Language agnostic RESTful data access to Ensembl data over HTTP

    Perl 149 63

  5. ensembl ensembl Public archive

    The Ensembl Core Perl API and SQL schema

    Perl 85 78

  6. ensembl-pipeline ensembl-pipeline Public archive

    *DEPRECATED* Job management for the Ensembl Genebuild pipeline

    Perl 62 29

Repositories

Showing 10 of 218 repositories
  • ensembl-genes-nf Public

    Ensembl Genebuild NextFlow pipelines

    Ensembl/ensembl-genes-nf's past year of commit activity
    Nextflow 2 6 0 3 Updated Nov 1, 2026
  • ensembl-client Public

    The frontend of the new Ensembl website

    Ensembl/ensembl-client's past year of commit activity
    TypeScript 17 Apache-2.0 4 0 7 Updated Nov 1, 2026
  • Ensembl/ensembl-vep-py's past year of commit activity
    Python 0 Apache-2.0 0 0 8 Updated Oct 31, 2026
  • ensembl-genes Public

    Python Ensembl Gene Annotation code source repository

    Ensembl/ensembl-genes's past year of commit activity
    Python 4 Apache-2.0 4 0 3 Updated Oct 30, 2026
  • Ensembl/ensembl-genes-containers's past year of commit activity
    Dockerfile 0 Apache-2.0 0 0 1 Updated Oct 30, 2026
  • ensembl-dauphin-style-compiler Public

    "dauphin" style-compiler for genome browser

    Ensembl/ensembl-dauphin-style-compiler's past year of commit activity
    Rust 0 1 10 2 Updated Oct 30, 2026
  • ensembl-anno Public

    Ensembl Automatic annotation pipeline

    Ensembl/ensembl-anno's past year of commit activity
    Python 11 Apache-2.0 7 1 2 Updated Oct 30, 2026
  • Ensembl/ensembl-web-resolver's past year of commit activity
    Python 0 Apache-2.0 0 0 1 Updated Oct 30, 2026
  • VEP_plugins Public

    Plugins for the Ensembl Variant Effect Predictor (VEP)

    Ensembl/VEP_plugins's past year of commit activity
    Perl 174 Apache-2.0 123 8 7 Updated Oct 30, 2026
  • ensembl-analysis Public

    Modules to interface with tools used in Ensembl Gene Annotation Process and scripts to run pipelines

    Ensembl/ensembl-analysis's past year of commit activity
    Perl 18 Apache-2.0 36 0 2 Updated Oct 30, 2026