Kluger Lab

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1. FIt-SNE FIt-SNE Public

   Fast Fourier Transform-accelerated Interpolation-based t-SNE (FIt-SNE)

   C++ 609 113

2. SpectralNet SpectralNet Public

   Deep network that performs spectral clustering

   Python 332 104

3. ALRA ALRA Public

   Imputation method for scRNA-seq based on low-rank approximation

   R 82 23

4. GeneTrajectory GeneTrajectory Public

   R implementation of GeneTrajectory

   R 72 8

5. t-SNE-Heatmaps t-SNE-Heatmaps Public

   Beta version of 1D t-SNE heatmaps to visualize expression patterns of hundreds of genes simultaneously in scRNA-seq

   R 49 11

6. pyFIt-SNE pyFIt-SNE Public

   Python Wrapper for FIt-SNE

   C++ 46 12